Geneious Tool name | Geneious |
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URL | http://www.geneious.com/ |
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Important features | 1. The Geneious Pro sequence viewer is a landmark innovation in the field of sequence analysis and is a critical feature that differentiates Geneious Pro from all other competitors.
2. Geneious chooses the viewers which suit the selected data automatically.
3. It displays DNA and protein sequences with annotations alongside sequences and visualize your entire contig of regular or NGS sequence data and zoom right down the nucleotide level to identify SNPs, regions of low/high coverage, or other interesting biological features.
4. It displays sequences with their sequence traces and visualize the success of your experiment with the quality score coloring scheme. |
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Citations | |
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Year of publication | Not available |
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Rank by usage frequency | 100 |
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Comments | Free trial downloadable version is available for 14 days. |
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Function | Alignment/Mapping, De novo assembler, Reference assembler, Visualization, SNP discovery, Indel discovery, Structural variant discovery, RNA seq analysis, Software package |
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Category | Paid, Downloadable |
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License | |
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Status | |
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Input file format | SAM/BAM format, FASTQ, .bed, FASTA, genbank flat, .csFasta, .sff, .txt,.seq |
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Output file format | SAM/BAM format, BED, FASTQ, .qual,genbank flat,FASTA, geneious format
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Operating system | Windows, Mac OS X, Linux |
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Operating language | Java 6 |
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Platform | ABI SOLiD, Illumina/Solexa, Roche 454 |
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Maintained by | Max Planck Institute for Developmental Biology, TFCbingen
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Downloadable file format | |
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Submission file format | |
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